Laurasiatherian RNA sequence data
Source
Data have been taken from the former repository of the Allan Wilson Centre and were converted to R format by klaus.schliep@gmail.com.
Examples
data(Laurasiatherian)
str(Laurasiatherian)
#> List of 47
#> $ Platypus : int [1:1605] 4 1 1 1 3 3 4 4 4 3 ...
#> $ Wallaroo : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ Possum : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ Bandicoot : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ Opposum : int [1:1605] 2 1 4 1 3 3 4 4 4 3 ...
#> $ Armadillo : int [1:1605] 2 1 2 1 3 3 4 2 4 3 ...
#> $ Elephant : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ Aardvark : int [1:1605] 4 1 1 1 3 3 4 4 4 3 ...
#> $ Tenrec : int [1:1605] 4 1 1 1 3 3 4 4 4 3 ...
#> $ Hedghog : int [1:1605] 1 4 1 1 3 3 4 2 4 3 ...
#> $ Gymnure : int [1:1605] 1 1 1 1 3 3 4 2 4 3 ...
#> $ Mole : int [1:1605] 1 1 1 1 3 3 4 4 4 3 ...
#> $ Shrew : int [1:1605] 4 1 1 1 3 3 4 4 4 3 ...
#> $ Rbat : int [1:1605] 2 1 4 1 3 3 2 4 4 2 ...
#> $ FlyingFox : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ RyFlyFox : int [1:1605] 4 1 1 1 3 3 4 4 4 3 ...
#> $ FruitBat : int [1:1605] 4 1 4 1 3 3 4 4 4 3 ...
#> $ LongTBat : int [1:1605] 2 1 4 1 3 3 4 4 4 3 ...
#> $ Horse : int [1:1605] 2 1 4 1 3 3 2 4 4 3 ...
#> $ Donkey : int [1:1605] 2 1 4 1 3 3 2 4 4 3 ...
#> $ WhiteRhino: int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ IndianRhin: int [1:1605] 2 1 4 1 3 3 4 4 4 3 ...
#> $ Pig : int [1:1605] 2 1 2 1 3 3 4 4 4 3 ...
#> $ Alpaca : int [1:1605] 2 1 2 1 3 3 4 4 4 1 ...
#> $ Cow : int [1:1605] 2 1 4 1 3 3 4 4 4 3 ...
#> $ Sheep : int [1:1605] 4 1 4 1 3 3 4 4 4 3 ...
#> $ Hippo : int [1:1605] 4 1 2 1 3 3 4 4 4 3 ...
#> $ FinWhale : int [1:1605] 4 1 1 1 3 3 4 4 4 3 ...
#> $ BlueWhale : int [1:1605] 4 1 1 1 3 3 4 4 4 3 ...
#> $ SpermWhale: int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ Rabbit : int [1:1605] 4 1 1 1 3 3 4 4 4 3 ...
#> $ Pika : int [1:1605] 1 1 4 1 3 3 4 4 4 3 ...
#> $ Squirrel : int [1:1605] 2 1 4 1 3 3 4 4 4 3 ...
#> $ Dormouse : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ GuineaPig : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ Mouse : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ Vole : int [1:1605] 1 1 1 1 3 3 4 4 4 3 ...
#> $ CaneRat : int [1:1605] 2 1 1 1 4 3 4 4 4 3 ...
#> $ Baboon : int [1:1605] 1 1 4 1 3 3 2 4 4 3 ...
#> $ Human : int [1:1605] 1 1 4 1 3 3 4 4 4 3 ...
#> $ Loris : int [1:1605] 2 1 2 1 3 3 4 4 4 3 ...
#> $ Cebus : int [1:1605] 2 1 2 1 3 3 4 4 4 3 ...
#> $ Cat : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ Dog : int [1:1605] 4 1 1 1 3 3 4 4 4 3 ...
#> $ HarbSeal : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ FurSeal : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> $ GraySeal : int [1:1605] 2 1 1 1 3 3 4 4 4 3 ...
#> - attr(*, "class")= chr "phyDat"
#> - attr(*, "weight")= int [1:1605] 1 5 1 444 3 314 1 1 328 1 ...
#> - attr(*, "nr")= int 1605
#> - attr(*, "nc")= num 4
#> - attr(*, "index")= int [1:3179] 1 2 3 4 5 6 7 8 9 6 ...
#> - attr(*, "levels")= chr [1:4] "a" "c" "g" "t"
#> - attr(*, "allLevels")= chr [1:18] "a" "c" "g" "t" ...
#> - attr(*, "type")= chr "DNA"
#> - attr(*, "contrast")= num [1:18, 1:4] 1 0 0 0 0 1 1 1 0 0 ...
#> ..- attr(*, "dimnames")=List of 2
#> .. ..$ : NULL
#> .. ..$ : chr [1:4] "a" "c" "g" "t"